CDS

Accession Number TCMCG051C10883
gbkey CDS
Protein Id XP_002303484.1
Location join(13026566..13026604,13026669..13026749,13026851..13026913,13027125..13027234,13027344..13027444,13027970..13028031,13028180..13028320,13028452..13028580,13029205..13029251,13030542..13030605,13031414..13031534,13031720..13031778,13031867..13031935,13032805..13032945,13033106..13033170,13033787..13033883,13034284..13034343,13035175..13035327,13036035..13036101,13036186..13036287,13037238..13037396,13037888..13038100,13038443..13038609)
Gene LOC7465490
GeneID 7465490
Organism Populus trichocarpa

Protein

Length 769aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002303448.3
Definition cleavage stimulation factor subunit 77 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage stimulation factor subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14408        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006353        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006369        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCTGTCGATAATGGAGCTCAATCTGAAACAAAGGATCAAGCAACAACAAGTACTACTGCTGCGACTGATCCATACAATGTCGAAGCTGCAGAAATATTAGCTAGCAGCGCACAGCATATGCCGATTGCCCAAGCTGCACCGATATATGAGCAAATCCTTTCACTGTTTCCCACTGCCTCAAAATTTTGGAAACAATATGCGGAGGCACATATGGCTGTGAATAATGATGATGCTATAAAACAGATATTTAGCCGGTGTTTATTGAATTGTCTTCATATTCCTCTTTGGCGATGCTACATTCGATTCATCAGAAAGGTCAATGAGAAGAAGGGTGCAGACGGGCAGGATGAAATAAGAAAAGCTTTTGACTTCATGCTTGGTTATGTTGGGGCAGACATGGCATCTGGGCCTGTATGGATGGAATACATTACCTTTCTGAAGTCACTACCAGCTCAAACTGCACAGGAAGAGTCAATACGGATGACCGCTATACGTAAAACATACCAGAAAGCGATTATCACTCCTACCCATCATGTTGAACAACTCTGGAGAGAATATGAAAATTTTGAAAATTCTGTCAGCCGGCAATTGGCCAAAGGACTCGTATCTGAATATCAACCAAAATATAACAGTGCCAGGGCTGTCTATAGGGAGCAGAAGAAATATGTTGACGAAATTGATTATAATATGCTAGCTGTACCACCAACTGGATCTTTCAAGGAAGAACAACAATGGATGGCTTGGAAGAGATTTTTGACGTTTGAGAAAGGAAACCCCCAAAGGATAGACAGCGTGTCCTCCAACAAACGAATTATATTCACCTATGAGCAGTGTCTGATGTATTTGTATCATTATCAAGATGTATGGTATGACTATGCTACCTGGCATGCAAAAAGTGGCTCTATAGATTCTGCAATCAAAGTGTTTCAGAGGGCTTTGAAGGCTCTTCCAGATTCAGATACGCTGAAGTATGCTTATGCTGAGTTGGAGGAATCTCGTGGAGCAATCCAGCCTGCAAGGAAAATCTACGAAAGCCTCTTGGGAGATGGTGTTAATGCAACAGCACTAGCTCATATACAGTTTATTCGCTTTCTAAGAAGGAATGAAGGAGTGGAAGCAGCTCGCAAGTACTTCTTAGATGCTCGGAAATCCCCAGACTGCTCTTATCATGTTTATGTTGCTTATGCTTTGATAGCATTTTGTCTGGACAAGGATTCAAAGATCGCGCACAATATTTTTGAAGCAGGATTGAAACGCTTCATGCATGAACCAGTGTACATTCTGGAATATGCAGATTTCTTGTCCCGTTTGAATGATGAGAGAAACATTCGAGCTTTATTTGAGCGTGCATTAAGCTCGCTACCACCCGAGGAATCTGTTGAGGTCTGGAAACGATATATCCAGTTTGAGCAAACATATGGTGATCTTGCCAGCATGTTGAAGGTCGAGCAAAGAAGAAAAGAAGCTCTTTCGAGGACAGGGGAAGATGGAGCATCAGCATTAGAGAGTTCATTGCAGGATGTTGTGTCACGGTATAGTTTCATGGATCTTTGGCCATGCTCCTCTAAGGATTTGGATCACTTAGCTCGGCAAGAGTGGCTAGCTAAAAATATTAATAAGAAAGCAGAGAAGTCTGCTGTTTCTAATGGACCTGCGACTTTAGATAAGATTCCTGCTGGTCTGGCAAGTAATTCAAATGTATCTGGTAAAGTAATTTATCCAGATACCTCACAAACGGTAATTTATGACCCAAGGCAAAAGCTAGAGGCTGGAATTCCACCTAGCACAACAGCGTCTGGGTTCAAGGCTGCTTCTAACCCATTGTCGAATCCTATTGGATTGGCACCCAATGTATTTGATGAGGTGCTGAAAGCAACACCACCTGCATTGATATCTTTTTTAGCAAACTTGCCCGTAGTTGAAGGTCCTGCACCAAATGTAGATATTGTATTATCAATTTGTTTGCAGAGTGACGTACCTGTTGGGAAAACAGGAAAGTCAGGGACAACCCAAACTCCAATGCTTTCTGGTCCTGCAACAAGTGATCTTTCTGGTTCGAGCAGATCACGTCCTGTCCCAAGCGGTTCATCTTTCAAAACACGGGATAGACAATCTGGGAAACGGAAGGACCGAGACAGGCAAGAAGAAGATGAAACGGCGACCGTCCAAAGCCAACCATTACCTAGAGATGTTTTCAGGATACGGCAGATTCAAAAATCGCGAGCTGCTGCTACCACTTCACAGACAGGGTCAGTATCATACGGAAGTGCTCTTTCAGGAGATCTGTCTGGTAGTACCACCTGA
Protein:  
MASVDNGAQSETKDQATTSTTAATDPYNVEAAEILASSAQHMPIAQAAPIYEQILSLFPTASKFWKQYAEAHMAVNNDDAIKQIFSRCLLNCLHIPLWRCYIRFIRKVNEKKGADGQDEIRKAFDFMLGYVGADMASGPVWMEYITFLKSLPAQTAQEESIRMTAIRKTYQKAIITPTHHVEQLWREYENFENSVSRQLAKGLVSEYQPKYNSARAVYREQKKYVDEIDYNMLAVPPTGSFKEEQQWMAWKRFLTFEKGNPQRIDSVSSNKRIIFTYEQCLMYLYHYQDVWYDYATWHAKSGSIDSAIKVFQRALKALPDSDTLKYAYAELEESRGAIQPARKIYESLLGDGVNATALAHIQFIRFLRRNEGVEAARKYFLDARKSPDCSYHVYVAYALIAFCLDKDSKIAHNIFEAGLKRFMHEPVYILEYADFLSRLNDERNIRALFERALSSLPPEESVEVWKRYIQFEQTYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAGIPPSTTASGFKAASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIVLSICLQSDVPVGKTGKSGTTQTPMLSGPATSDLSGSSRSRPVPSGSSFKTRDRQSGKRKDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGSTT